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Author Title [ Type(Desc)] Year
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Journal Article
K. Zeng, Erus, G., Sotiras, A., Shinohara, R. T., and Davatzikos, C., Abnormality detection via iterative deformable registration and basis-pursuit decomposition., IEEE Trans Med Imaging, 2016.
K. A. Linn, Gaonkar, B., Doshi, J., Davatzikos, C., and Shinohara, R. T., Addressing Confounding in Predictive Models with an Application to Neuroimaging., Int J Biostat, vol. 12, no. 1, pp. 31-44, 2016.
R. Ciric, Wolf, D. H., Power, J. D., Roalf, D. R., Baum, G. L., Ruparel, K., Shinohara, R. T., Elliott, M. A., Eickhoff, S. B., Davatzikos, C., Gur, R. C., Gur, R. E., Bassett, D. S., and Satterthwaite, T. D., Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity., Neuroimage, vol. 154, pp. 174-187, 2017.
Q. Ma, Zhang, T., Zanetti, M. V., Shen, H., Satterthwaite, T. D., Wolf, D. H., Gur, R. E., Fan, Y., Hu, D., Busatto, G. F., and Davatzikos, C., Classification of multi-site MR images in the presence of heterogeneity using multi-task learning., Neuroimage Clin, vol. 19, pp. 476-486, 2018.
T. D. Satterthwaite, Kable, J. W., Vandekar, L., Katchmar, N., Bassett, D. S., Baldassano, C. F., Ruparel, K., Elliott, M. A., Sheline, Y. I., Gur, R. C., Gur, R. E., Davatzikos, C., Leibenluft, E., Thase, M. E., and Wolf, D. H., Common and Dissociable Dysfunction of the Reward System in Bipolar and Unipolar Depression., Neuropsychopharmacology, vol. 40, no. 9, pp. 2258-68, 2015.
A. Sharma, Wolf, D. H., Ciric, R., Kable, J. W., Moore, T. M., Vandekar, S. N., Katchmar, N., Daldal, A., Ruparel, K., Davatzikos, C., Elliott, M. A., Calkins, M. E., Shinohara, R. T., Bassett, D. S., and Satterthwaite, T. D., Common Dimensional Reward Deficits Across Mood and Psychotic Disorders: A Connectome-Wide Association Study., Am J Psychiatry, vol. 174, no. 7, pp. 657-666, 2017.
C. Davatzikos, Computational neuroanatomy using brain deformations: From brain parcellation to multivariate pattern analysis and machine learning., Med Image Anal, vol. 33, pp. 149-154, 2016.
M. Ingalhalikar, Parker, D., Ghanbari, Y., Smith, A., Hua, K., Mori, S., Abel, T., Davatzikos, C., and Verma, R., Connectome and Maturation Profiles of the Developing Mouse Brain Using Diffusion Tensor Imaging., Cereb Cortex, vol. 25, no. 9, pp. 2696-706, 2015.
K. A. Linn, Gaonkar, B., Satterthwaite, T. D., Doshi, J., Davatzikos, C., and Shinohara, R. T., Control-group feature normalization for multivariate pattern analysis of structural MRI data using the support vector machine., Neuroimage, vol. 132, pp. 157-166, 2016.
E. A. Hartung, Laney, N., Kim, J. Young, Ruebner, R. L., Detre, J. A., Liu, H. - S., Davatzikos, C., Erus, G., Doshi, J. J., Schultz, R. T., Herrington, J. D., Jawad, A. F., Moodalbail, D. G., Gur, R. C., Port, A. M., Radcliffe, J., Hooper, S. R., and Furth, S. L., Design and methods of the NiCK study: neurocognitive assessment and magnetic resonance imaging analysis of children and young adults with chronic kidney disease., BMC Nephrol, vol. 16, p. 66, 2015.
T. M. Moore, Reise, S. P., Roalf, D. R., Satterthwaite, T. D., Davatzikos, C., Bilker, W. B., Port, A. M., Jackson, C. T., Ruparel, K., Savitt, A. P., Baron, R. B., Gur, R. E., and Gur, R. C., Development of an itemwise efficiency scoring method: Concurrent, convergent, discriminant, and neuroimaging-based predictive validity assessed in a large community sample., Psychol Assess, vol. 28, no. 12, pp. 1529-1542, 2016.
S. R. Waldstein, Dore, G. A., Davatzikos, C., Katzel, L. I., Gullapalli, R., Seliger, S. L., Kouo, T., Rosenberger, W. F., Erus, G., Evans, M. K., and others, Differential Associations of Socioeconomic Status With Global Brain Volumes and White Matter Lesions in African American and White Adults: the HANDLS SCAN Study., Psychosomatic Medicine, 2016.
M. Ouyang, Jeon, T., Sotiras, A., Peng, Q., Mishra, V., Halovanic, C., Chen, M., Chalak, L., Rollins, N., Roberts, T. P. L., Davatzikos, C., and Huang, H., Differential cortical microstructural maturation in the preterm human brain with diffusion kurtosis and tensor imaging., Proc Natl Acad Sci U S A, 2019.
M. Pehlivanova, Wolf, D. H., Sotiras, A., Kaczkurkin, A. N., Moore, T. M., Ciric, R., Cook, P. A., de La Garza, A. Garcia, Rosen, A. F. G., Ruparel, K., Sharma, A., Shinohara, R. T., Roalf, D. R., Gur, R. C., Davatzikos, C., Gur, R. E., Kable, J. W., and Satterthwaite, T. D., Diminished Cortical Thickness Is Associated with Impulsive Choice in Adolescence., J Neurosci, vol. 38, no. 10, pp. 2471-2481, 2018.
D. Sahoo, Davatzikos, C., and Bassett, D., Extraction of hierarchical functional connectivity components in human brain using resting-state fMRI, arXiv preprint arXiv:1906.08365, 2019.
E. Varol, Gaonkar, B., Erus, G., Schultz, R., and Davatzikos, C., FEATURE RANKING BASED NESTED SUPPORT VECTOR MACHINE ENSEMBLE FOR MEDICAL IMAGE CLASSIFICATION., Proc IEEE Int Symp Biomed Imaging, pp. 146-149, 2012.
T. D. Satterthwaite, Wolf, D. H., Erus, G., Ruparel, K., Elliott, M. A., Gennatas, E. D., Hopson, R., Jackson, C., Prabhakaran, K., Bilker, W. B., Calkins, M. E., Loughead, J., Smith, A., Roalf, D. R., Hakonarson, H., Verma, R., Davatzikos, C., Gur, R. C., and Gur, R. E., Functional maturation of the executive system during adolescence., J Neurosci, vol. 33, no. 41, pp. 16249-61, 2013.
T. D. Satterthwaite, Wolf, D. H., Ruparel, K., Erus, G., Elliott, M. A., Eickhoff, S. B., Gennatas, E. D., Jackson, C., Prabhakaran, K., Smith, A., Hakonarson, H., Verma, R., Davatzikos, C., Gur, R. E., and Gur, R. C., Heterogeneous impact of motion on fundamental patterns of developmental changes in functional connectivity during youth., Neuroimage, vol. 83, pp. 45-57, 2013.
H. Eavani, Satterthwaite, T. D., Filipovych, R., Gur, R. E., Gur, R. C., and Davatzikos, C., Identifying Sparse Connectivity Patterns in the brain using resting-state fMRI., Neuroimage, vol. 105, pp. 286-99, 2015.
G. Erus, Battapady, H., Satterthwaite, T. D., Hakonarson, H., Gur, R. E., Davatzikos, C., and Gur, R. C., Imaging patterns of brain development and their relationship to cognition., Cereb Cortex, vol. 25, no. 6, pp. 1676-84, 2015.
C. Huchuan Xia, Ma, Z., Ciric, R., Gu, S., Betzel, R. F., Kaczkurkin, A. N., Calkins, M. E., Cook, P. A., de La Garza, A. Garcia, Vandekar, S. N., Cui, Z., Moore, T. M., Roalf, D. R., Ruparel, K., Wolf, D. H., Davatzikos, C., Gur, R. C., Gur, R. E., Shinohara, R. T., Bassett, D. S., and Satterthwaite, T. D., Linked dimensions of psychopathology and connectivity in functional brain networks., Nat Commun, vol. 9, no. 1, p. 3003, 2018.
T. D. Satterthwaite, Wolf, D. H., Roalf, D. R., Ruparel, K., Erus, G., Vandekar, S., Gennatas, E. D., Elliott, M. A., Smith, A., Hakonarson, H., Verma, R., Davatzikos, C., Gur, R. E., and Gur, R. C., Linked Sex Differences in Cognition and Functional Connectivity in Youth., Cereb Cortex, vol. 25, no. 9, pp. 2383-94, 2015.
C. Davatzikos, Machine learning in neuroimaging: Progress and challenges., Neuroimage, vol. 197, pp. 652-656, 2019.
E. Varol, Sotiras, A., and Davatzikos, C., MIDAS: Regionally linear multivariate discriminative statistical mapping., Neuroimage, vol. 174, pp. 111-126, 2018.
R. Ciric, Rosen, A. F. G., Erus, G., Cieslak, M., Adebimpe, A., Cook, P. A., Bassett, D. S., Davatzikos, C., Wolf, D. H., and Satterthwaite, T. D., Mitigating head motion artifact in functional connectivity MRI., Nat Protoc, vol. 13, no. 12, pp. 2801-2826, 2018.
T. D. Satterthwaite, Ciric, R., Roalf, D. R., Davatzikos, C., Bassett, D. S., and Wolf, D. H., Motion artifact in studies of functional connectivity: Characteristics and mitigation strategies., Hum Brain Mapp, vol. 40, no. 7, pp. 2033-2051, 2019.
J. Doshi, Erus, G., Ou, Y., Resnick, S. M., Gur, R. C., Gur, R. E., Satterthwaite, T. D., Furth, S., and Davatzikos, C., MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection., Neuroimage, vol. 127, pp. 186-195, 2016.
Z. Yang, Gu, S., Honnorat, N., Linn, K. A., Shinohara, R. T., Aselcioglu, I., Bruce, S., Oathes, D. J., Davatzikos, C., Satterthwaite, T. D., Bassett, D. S., and Sheline, Y. I., Network changes associated with transdiagnostic depressive symptom improvement following cognitive behavioral therapy in MDD and PTSD., Mol Psychiatry, vol. 23, no. 12, pp. 2314-2323, 2018.
T. D. Satterthwaite, Elliott, M. A., Ruparel, K., Loughead, J., Prabhakaran, K., Calkins, M. E., Hopson, R., Jackson, C., Keefe, J., Riley, M., Mentch, F. D., Sleiman, P., Verma, R., Davatzikos, C., Hakonarson, H., Gur, R. C., and Gur, R. E., Neuroimaging of the Philadelphia neurodevelopmental cohort., Neuroimage, vol. 86, pp. 544-53, 2014.
P. Gross, Honnorat, N., Varol, E., Wallner, M., Trappanese, D. M., Sharp, T. E., Starosta, T., Duran, J. M., Koller, S., Davatzikos, C., and Houser, S. R., Nuquantus: Machine learning software for the characterization and quantification of cell nuclei in complex immunofluorescent tissue images., Sci Rep, vol. 6, p. 23431, 2016.
M. K. Belmonte, Mazziotta, J. C., Minshew, N. J., Evans, A. C., Courchesne, E., Dager, S. R., Bookheimer, S. Y., Aylward, E. H., Amaral, D. G., Cantor, R. M., Chugani, D. C., Dale, A. M., Davatzikos, C., Gerig, G., Herbert, M. R., Lainhart, J. E., Murphy, D. G., Piven, J., Reiss, A. L., Schultz, R. T., Zeffiro, T. A., Levi-Pearl, S., Lajonchere, C., and Colamarino, S. A., Offering to share: how to put heads together in autism neuroimaging., J Autism Dev Disord, vol. 38, no. 1, pp. 2-13, 2008.
A. Sotiras, Toledo, J. B., Gur, R. E., Gur, R. C., Satterthwaite, T. D., and Davatzikos, C., Patterns of coordinated cortical remodeling during adolescence and their associations with functional specialization and evolutionary expansion., Proc Natl Acad Sci U S A, vol. 114, no. 13, pp. 3527-3532, 2017.
A. F. G. Rosen, Roalf, D. R., Ruparel, K., Blake, J., Seelaus, K., Villa, L. P., Ciric, R., Cook, P. A., Davatzikos, C., Elliott, M. A., de La Garza, A. Garcia, Gennatas, E. D., Quarmley, M., J Schmitt, E., Shinohara, R. T., M Tisdall, D., R Craddock, C., Gur, R. E., Gur, R. C., and Satterthwaite, T. D., Quantitative assessment of structural image quality., Neuroimage, vol. 169, pp. 407-418, 2018.
N. Honnorat and Davatzikos, C., Riccati-regularized Precision Matrices for Neuroimaging, arXiv preprint arXiv:1612.03428, 2016.
T. D. Satterthwaite, Wolf, D. H., Calkins, M. E., Vandekar, S. N., Erus, G., Ruparel, K., Roalf, D. R., Linn, K. A., Elliott, M. A., Moore, T. M., Hakonarson, H., Shinohara, R. T., Davatzikos, C., Gur, R. C., and Gur, R. E., Structural Brain Abnormalities in Youth With Psychosis Spectrum Symptoms., JAMA Psychiatry, vol. 73, no. 5, pp. 515-24, 2016.
N. Honnorat, Parker, D., Tunc, B., Davatzikos, C., and Verma, R., Subject-Specific Structural Parcellations Based on Randomized AB-divergences., Med Image Comput Comput Assist Interv, vol. 10433, pp. 407-415, 2017.
T. D. Satterthwaite and Davatzikos, C., Towards an Individualized Delineation of Functional Neuroanatomy., Neuron, vol. 87, no. 3, pp. 471-3, 2015.